Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Gm10232-201ENSMUST00000089221 720 ntBASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmem56Q8CGF5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.83■□□□□ 0.45
Tmem56Q8CGF5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmem56Q8CGF5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmem56Q8CGF5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmem56Q8CGF5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmem56Q8CGF5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem56Q8CGF5 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.81■□□□□ 0.44
Tmem56Q8CGF5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.8■□□□□ 0.44
Tmem56Q8CGF5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem56Q8CGF5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Gm10399-202ENSMUST00000202768 748 ntBASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.78■□□□□ 0.44
Tmem56Q8CGF5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem56Q8CGF5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem56Q8CGF5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem56Q8CGF5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmem56Q8CGF5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tmem56Q8CGF5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem56Q8CGF5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem56Q8CGF5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.74■□□□□ 0.43
Tmem56Q8CGF5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Tmem56Q8CGF5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms