Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SynpoQ8CC35 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
SynpoQ8CC35 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SynpoQ8CC35 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SynpoQ8CC35 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.98■□□□□ 0.79
SynpoQ8CC35 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SynpoQ8CC35 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SynpoQ8CC35 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SynpoQ8CC35 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SynpoQ8CC35 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SynpoQ8CC35 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SynpoQ8CC35 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SynpoQ8CC35 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SynpoQ8CC35 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SynpoQ8CC35 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.96■□□□□ 0.79
SynpoQ8CC35 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.96■□□□□ 0.79
SynpoQ8CC35 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SynpoQ8CC35 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SynpoQ8CC35 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SynpoQ8CC35 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.95■□□□□ 0.78
SynpoQ8CC35 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.95■□□□□ 0.78
SynpoQ8CC35 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SynpoQ8CC35 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.94■□□□□ 0.78
SynpoQ8CC35 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SynpoQ8CC35 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SynpoQ8CC35 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SynpoQ8CC35 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SynpoQ8CC35 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SynpoQ8CC35 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SynpoQ8CC35 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.91■□□□□ 0.78
SynpoQ8CC35 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.91■□□□□ 0.78
SynpoQ8CC35 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SynpoQ8CC35 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SynpoQ8CC35 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SynpoQ8CC35 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SynpoQ8CC35 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.91■□□□□ 0.78
SynpoQ8CC35 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SynpoQ8CC35 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SynpoQ8CC35 Gm40881-201ENSMUST00000223397 166 ntBASIC19.9■□□□□ 0.78
SynpoQ8CC35 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SynpoQ8CC35 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SynpoQ8CC35 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SynpoQ8CC35 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SynpoQ8CC35 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms