Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rft1Q8C3B8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rft1Q8C3B8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rft1Q8C3B8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rft1Q8C3B8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rft1Q8C3B8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Gm5921-201ENSMUST00000075898 882 ntBASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.35■□□□□ 0.53
Rft1Q8C3B8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rft1Q8C3B8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rft1Q8C3B8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rft1Q8C3B8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rft1Q8C3B8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rft1Q8C3B8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rft1Q8C3B8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rft1Q8C3B8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.32■□□□□ 0.52
Rft1Q8C3B8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rft1Q8C3B8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rft1Q8C3B8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.31■□□□□ 0.52
Rft1Q8C3B8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rft1Q8C3B8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rft1Q8C3B8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rft1Q8C3B8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rft1Q8C3B8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rft1Q8C3B8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rft1Q8C3B8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rft1Q8C3B8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rft1Q8C3B8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rft1Q8C3B8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rft1Q8C3B8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rft1Q8C3B8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rft1Q8C3B8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rft1Q8C3B8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms