Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptcd1Q8C2E4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ptcd1Q8C2E4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ptcd1Q8C2E4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ptcd1Q8C2E4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ptcd1Q8C2E4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC25.72■■□□□ 1.71
Ptcd1Q8C2E4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptcd1Q8C2E4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ptcd1Q8C2E4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Ptcd1Q8C2E4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptcd1Q8C2E4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptcd1Q8C2E4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Ptcd1Q8C2E4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptcd1Q8C2E4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptcd1Q8C2E4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Ptcd1Q8C2E4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Gm8493-201ENSMUST00000196881 489 ntBASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ptcd1Q8C2E4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptcd1Q8C2E4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptcd1Q8C2E4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC25.69■■□□□ 1.7
Ptcd1Q8C2E4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptcd1Q8C2E4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptcd1Q8C2E4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptcd1Q8C2E4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptcd1Q8C2E4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
Ptcd1Q8C2E4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ptcd1Q8C2E4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ptcd1Q8C2E4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ptcd1Q8C2E4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC25.66■■□□□ 1.7
Ptcd1Q8C2E4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.66■■□□□ 1.7
Ptcd1Q8C2E4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Ptcd1Q8C2E4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptcd1Q8C2E4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptcd1Q8C2E4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ptcd1Q8C2E4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptcd1Q8C2E4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptcd1Q8C2E4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptcd1Q8C2E4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ptcd1Q8C2E4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ptcd1Q8C2E4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ptcd1Q8C2E4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC25.64■■□□□ 1.7
Ptcd1Q8C2E4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ptcd1Q8C2E4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ptcd1Q8C2E4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ptcd1Q8C2E4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptcd1Q8C2E4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ptcd1Q8C2E4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Ptcd1Q8C2E4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.6■■□□□ 1.69
Ptcd1Q8C2E4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.6■■□□□ 1.69
Ptcd1Q8C2E4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ptcd1Q8C2E4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ptcd1Q8C2E4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ptcd1Q8C2E4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms