Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ska3Q8C263 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.53■□□□□ 0.72
Ska3Q8C263 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ska3Q8C263 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.53■□□□□ 0.72
Ska3Q8C263 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.53■□□□□ 0.72
Ska3Q8C263 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ska3Q8C263 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ska3Q8C263 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ska3Q8C263 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ska3Q8C263 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ska3Q8C263 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ska3Q8C263 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ska3Q8C263 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ska3Q8C263 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ska3Q8C263 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ska3Q8C263 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ska3Q8C263 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ska3Q8C263 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.51■□□□□ 0.71
Ska3Q8C263 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Gm40881-201ENSMUST00000223397 166 ntBASIC19.51■□□□□ 0.71
Ska3Q8C263 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska3Q8C263 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ska3Q8C263 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ska3Q8C263 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ska3Q8C263 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.5■□□□□ 0.71
Ska3Q8C263 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.5■□□□□ 0.71
Ska3Q8C263 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.5■□□□□ 0.71
Ska3Q8C263 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.5■□□□□ 0.71
Ska3Q8C263 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska3Q8C263 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska3Q8C263 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.5■□□□□ 0.71
Ska3Q8C263 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska3Q8C263 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska3Q8C263 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska3Q8C263 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Ska3Q8C263 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ska3Q8C263 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska3Q8C263 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska3Q8C263 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska3Q8C263 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska3Q8C263 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska3Q8C263 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska3Q8C263 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ska3Q8C263 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.48■□□□□ 0.71
Ska3Q8C263 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska3Q8C263 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska3Q8C263 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska3Q8C263 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ska3Q8C263 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ska3Q8C263 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ska3Q8C263 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.46■□□□□ 0.71
Ska3Q8C263 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ska3Q8C263 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ska3Q8C263 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.46■□□□□ 0.71
Ska3Q8C263 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ska3Q8C263 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.45■□□□□ 0.7
Ska3Q8C263 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ska3Q8C263 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.45■□□□□ 0.7
Ska3Q8C263 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.45■□□□□ 0.7
Ska3Q8C263 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.45■□□□□ 0.7
Ska3Q8C263 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ska3Q8C263 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska3Q8C263 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ska3Q8C263 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.44■□□□□ 0.7
Ska3Q8C263 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ska3Q8C263 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska3Q8C263 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska3Q8C263 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska3Q8C263 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ska3Q8C263 Etf1-202ENSMUST00000180351 108 ntBASIC19.44■□□□□ 0.7
Ska3Q8C263 Rps24-207ENSMUST00000224568 714 ntBASIC19.44■□□□□ 0.7
Ska3Q8C263 Gm9959-201ENSMUST00000068277 390 ntBASIC19.44■□□□□ 0.7
Ska3Q8C263 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska3Q8C263 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska3Q8C263 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska3Q8C263 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska3Q8C263 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ska3Q8C263 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska3Q8C263 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ska3Q8C263 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska3Q8C263 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.42■□□□□ 0.7
Ska3Q8C263 Gm45102-201ENSMUST00000207427 857 ntBASIC19.42■□□□□ 0.7
Ska3Q8C263 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska3Q8C263 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ska3Q8C263 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska3Q8C263 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ska3Q8C263 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska3Q8C263 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.42■□□□□ 0.7
Ska3Q8C263 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms