Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC28.77■■■□□ 2.2
Cps1Q8C196 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Cps1Q8C196 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cps1Q8C196 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC28.77■■■□□ 2.2
Cps1Q8C196 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Cps1Q8C196 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cps1Q8C196 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cps1Q8C196 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cps1Q8C196 Spcs1-204ENSMUST00000226782 949 ntBASIC28.75■■■□□ 2.19
Cps1Q8C196 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Cps1Q8C196 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC28.75■■■□□ 2.19
Cps1Q8C196 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Cps1Q8C196 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
Cps1Q8C196 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Cps1Q8C196 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Cps1Q8C196 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Cps1Q8C196 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cps1Q8C196 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cps1Q8C196 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cps1Q8C196 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cps1Q8C196 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Cps1Q8C196 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cps1Q8C196 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Cps1Q8C196 Gm43530-201ENSMUST00000195920 274 ntBASIC28.72■■■□□ 2.19
Cps1Q8C196 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cps1Q8C196 Gm26571-201ENSMUST00000181399 666 ntBASIC28.71■■■□□ 2.19
Cps1Q8C196 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Cps1Q8C196 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
Cps1Q8C196 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC28.7■■■□□ 2.19
Cps1Q8C196 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Cps1Q8C196 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC28.7■■■□□ 2.18
Cps1Q8C196 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Cps1Q8C196 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Cps1Q8C196 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cps1Q8C196 Gm6085-201ENSMUST00000182774 1470 ntBASIC28.69■■■□□ 2.18
Cps1Q8C196 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cps1Q8C196 Gm10849-201ENSMUST00000100397 618 ntBASIC28.69■■■□□ 2.18
Cps1Q8C196 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cps1Q8C196 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Cps1Q8C196 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cps1Q8C196 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Cps1Q8C196 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC28.68■■■□□ 2.18
Cps1Q8C196 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Cps1Q8C196 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC28.68■■■□□ 2.18
Cps1Q8C196 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Cps1Q8C196 Cdc34b-202ENSMUST00000188741 1252 ntBASIC28.68■■■□□ 2.18
Cps1Q8C196 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cps1Q8C196 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Cps1Q8C196 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Cps1Q8C196 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Cps1Q8C196 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Cps1Q8C196 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cps1Q8C196 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Cps1Q8C196 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC28.67■■■□□ 2.18
Cps1Q8C196 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC28.67■■■□□ 2.18
Cps1Q8C196 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cps1Q8C196 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cps1Q8C196 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Cps1Q8C196 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC28.66■■■□□ 2.18
Cps1Q8C196 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC28.66■■■□□ 2.18
Cps1Q8C196 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Cps1Q8C196 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Cps1Q8C196 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC28.65■■■□□ 2.18
Cps1Q8C196 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cps1Q8C196 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.65■■■□□ 2.18
Cps1Q8C196 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Cps1Q8C196 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Cps1Q8C196 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Cps1Q8C196 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
Cps1Q8C196 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
Cps1Q8C196 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
Cps1Q8C196 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cps1Q8C196 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC28.63■■■□□ 2.17
Cps1Q8C196 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC28.63■■■□□ 2.17
Cps1Q8C196 Gm7160-202ENSMUST00000188519 1027 ntBASIC28.63■■■□□ 2.17
Cps1Q8C196 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cps1Q8C196 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Cps1Q8C196 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cps1Q8C196 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC28.62■■■□□ 2.17
Cps1Q8C196 Gm26833-201ENSMUST00000180899 440 ntBASIC28.62■■■□□ 2.17
Cps1Q8C196 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC28.62■■■□□ 2.17
Cps1Q8C196 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC28.62■■■□□ 2.17
Cps1Q8C196 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Cps1Q8C196 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cps1Q8C196 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Cps1Q8C196 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cps1Q8C196 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cps1Q8C196 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cps1Q8C196 Gm7291-201ENSMUST00000199147 382 ntBASIC28.6■■■□□ 2.17
Cps1Q8C196 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC28.6■■■□□ 2.17
Cps1Q8C196 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cps1Q8C196 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cps1Q8C196 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cps1Q8C196 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cps1Q8C196 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cps1Q8C196 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cps1Q8C196 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC28.59■■■□□ 2.17
Cps1Q8C196 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cps1Q8C196 AC166356.1-201ENSMUST00000228236 1426 ntBASIC28.58■■■□□ 2.17
Cps1Q8C196 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms