Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpne3Q8BT60 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne3Q8BT60 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne3Q8BT60 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne3Q8BT60 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne3Q8BT60 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne3Q8BT60 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpne3Q8BT60 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cpne3Q8BT60 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpne3Q8BT60 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.95■□□□□ 0.78
Cpne3Q8BT60 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpne3Q8BT60 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne3Q8BT60 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.93■□□□□ 0.78
Cpne3Q8BT60 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Cap2-205ENSMUST00000225824 1634 ntBASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne3Q8BT60 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne3Q8BT60 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne3Q8BT60 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne3Q8BT60 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne3Q8BT60 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cpne3Q8BT60 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne3Q8BT60 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne3Q8BT60 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne3Q8BT60 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.9■□□□□ 0.78
Cpne3Q8BT60 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne3Q8BT60 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.9■□□□□ 0.78
Cpne3Q8BT60 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne3Q8BT60 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.89■□□□□ 0.77
Cpne3Q8BT60 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne3Q8BT60 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne3Q8BT60 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne3Q8BT60 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Cpne3Q8BT60 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne3Q8BT60 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.87■□□□□ 0.77
Cpne3Q8BT60 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.86■□□□□ 0.77
Cpne3Q8BT60 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne3Q8BT60 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne3Q8BT60 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cpne3Q8BT60 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.86■□□□□ 0.77
Cpne3Q8BT60 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms