Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC27.99■■■□□ 2.07
Col16a1Q8BLX7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC27.99■■■□□ 2.07
Col16a1Q8BLX7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col16a1Q8BLX7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Col16a1Q8BLX7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC27.96■■■□□ 2.07
Col16a1Q8BLX7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
Col16a1Q8BLX7 Gm4430-201ENSMUST00000192413 1943 ntBASIC27.96■■■□□ 2.07
Col16a1Q8BLX7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Col16a1Q8BLX7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Col16a1Q8BLX7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col16a1Q8BLX7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col16a1Q8BLX7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col16a1Q8BLX7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC27.95■■■□□ 2.07
Col16a1Q8BLX7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
Col16a1Q8BLX7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
Col16a1Q8BLX7 Gm26571-201ENSMUST00000181399 666 ntBASIC27.94■■■□□ 2.06
Col16a1Q8BLX7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Col16a1Q8BLX7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Col16a1Q8BLX7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC27.94■■■□□ 2.06
Col16a1Q8BLX7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Col16a1Q8BLX7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC27.94■■■□□ 2.06
Col16a1Q8BLX7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Col16a1Q8BLX7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC27.93■■■□□ 2.06
Col16a1Q8BLX7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC27.93■■■□□ 2.06
Col16a1Q8BLX7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Gm7291-201ENSMUST00000199147 382 ntBASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC27.92■■■□□ 2.06
Col16a1Q8BLX7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Col16a1Q8BLX7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Col16a1Q8BLX7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Gm5576-201ENSMUST00000075809 1236 ntBASIC27.9■■■□□ 2.06
Col16a1Q8BLX7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Col16a1Q8BLX7 Gm10849-201ENSMUST00000100397 618 ntBASIC27.89■■■□□ 2.05
Col16a1Q8BLX7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Col16a1Q8BLX7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Col16a1Q8BLX7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Col16a1Q8BLX7 Gm7143-201ENSMUST00000222811 859 ntBASIC27.88■■■□□ 2.05
Col16a1Q8BLX7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Col16a1Q8BLX7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col16a1Q8BLX7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Col16a1Q8BLX7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Col16a1Q8BLX7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col16a1Q8BLX7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Col16a1Q8BLX7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col16a1Q8BLX7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col16a1Q8BLX7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col16a1Q8BLX7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Col16a1Q8BLX7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col16a1Q8BLX7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col16a1Q8BLX7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Col16a1Q8BLX7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col16a1Q8BLX7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms