Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmbox1Q8BJA3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
Hmbox1Q8BJA3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmbox1Q8BJA3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.19■□□□□ 0.82
Hmbox1Q8BJA3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Hmbox1Q8BJA3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hmbox1Q8BJA3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmbox1Q8BJA3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmbox1Q8BJA3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmbox1Q8BJA3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmbox1Q8BJA3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.16■□□□□ 0.82
Hmbox1Q8BJA3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.16■□□□□ 0.82
Hmbox1Q8BJA3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmbox1Q8BJA3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmbox1Q8BJA3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hmbox1Q8BJA3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmbox1Q8BJA3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmbox1Q8BJA3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmbox1Q8BJA3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmbox1Q8BJA3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmbox1Q8BJA3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmbox1Q8BJA3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Hmbox1Q8BJA3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hmbox1Q8BJA3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hmbox1Q8BJA3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmbox1Q8BJA3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmbox1Q8BJA3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.13■□□□□ 0.81
Hmbox1Q8BJA3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.13■□□□□ 0.81
Hmbox1Q8BJA3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hmbox1Q8BJA3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmbox1Q8BJA3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.11■□□□□ 0.81
Hmbox1Q8BJA3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.11■□□□□ 0.81
Hmbox1Q8BJA3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmbox1Q8BJA3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmbox1Q8BJA3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmbox1Q8BJA3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmbox1Q8BJA3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmbox1Q8BJA3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmbox1Q8BJA3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Hmbox1Q8BJA3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmbox1Q8BJA3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmbox1Q8BJA3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmbox1Q8BJA3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmbox1Q8BJA3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmbox1Q8BJA3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmbox1Q8BJA3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmbox1Q8BJA3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Hmbox1Q8BJA3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hmbox1Q8BJA3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.08■□□□□ 0.8
Hmbox1Q8BJA3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Hmbox1Q8BJA3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmbox1Q8BJA3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms