Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SpidrQ8BGX7 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Gm18284-201ENSMUST00000172604 624 ntBASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Gm8495-201ENSMUST00000188740 694 ntBASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SpidrQ8BGX7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SpidrQ8BGX7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SpidrQ8BGX7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Gm43017-201ENSMUST00000198296 752 ntBASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.54■■□□□ 1.52
SpidrQ8BGX7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SpidrQ8BGX7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.52■■□□□ 1.52
SpidrQ8BGX7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.52■■□□□ 1.52
SpidrQ8BGX7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SpidrQ8BGX7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SpidrQ8BGX7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.51■■□□□ 1.51
SpidrQ8BGX7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SpidrQ8BGX7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SpidrQ8BGX7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.51■■□□□ 1.51
SpidrQ8BGX7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SpidrQ8BGX7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SpidrQ8BGX7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SpidrQ8BGX7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SpidrQ8BGX7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SpidrQ8BGX7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SpidrQ8BGX7 Gm8493-201ENSMUST00000196881 489 ntBASIC24.48■■□□□ 1.51
SpidrQ8BGX7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
SpidrQ8BGX7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.48■■□□□ 1.51
SpidrQ8BGX7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.47■■□□□ 1.51
SpidrQ8BGX7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SpidrQ8BGX7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SpidrQ8BGX7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SpidrQ8BGX7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SpidrQ8BGX7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.47■■□□□ 1.51
SpidrQ8BGX7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.46■■□□□ 1.51
SpidrQ8BGX7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SpidrQ8BGX7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.45■■□□□ 1.5
SpidrQ8BGX7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SpidrQ8BGX7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
SpidrQ8BGX7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SpidrQ8BGX7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SpidrQ8BGX7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SpidrQ8BGX7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SpidrQ8BGX7 Gm43173-201ENSMUST00000202246 593 ntBASIC24.43■■□□□ 1.5
SpidrQ8BGX7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms