Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpped1Q8BFS6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.3■□□□□ 0.84
Cpped1Q8BFS6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpped1Q8BFS6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpped1Q8BFS6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Cpped1Q8BFS6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpped1Q8BFS6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpped1Q8BFS6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Rps24-207ENSMUST00000224568 714 ntBASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Gm9959-201ENSMUST00000068277 390 ntBASIC20.24■□□□□ 0.83
Cpped1Q8BFS6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpped1Q8BFS6 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.22■□□□□ 0.83
Cpped1Q8BFS6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpped1Q8BFS6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Etf1-202ENSMUST00000180351 108 ntBASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpped1Q8BFS6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpped1Q8BFS6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpped1Q8BFS6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms