Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn34b3Q80ZS5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn34b3Q80ZS5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Gm15546-201ENSMUST00000122095 826 ntBASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.35■□□□□ 0.69
Cldn34b3Q80ZS5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn34b3Q80ZS5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn34b3Q80ZS5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cldn34b3Q80ZS5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn34b3Q80ZS5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Cldn34b3Q80ZS5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn34b3Q80ZS5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn34b3Q80ZS5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn34b3Q80ZS5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn34b3Q80ZS5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn34b3Q80ZS5 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.33■□□□□ 0.68
Cldn34b3Q80ZS5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn34b3Q80ZS5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn34b3Q80ZS5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn34b3Q80ZS5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn34b3Q80ZS5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldn34b3Q80ZS5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn34b3Q80ZS5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn34b3Q80ZS5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn34b3Q80ZS5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn34b3Q80ZS5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn34b3Q80ZS5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cldn34b3Q80ZS5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn34b3Q80ZS5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn34b3Q80ZS5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Gm40881-201ENSMUST00000223397 166 ntBASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn34b3Q80ZS5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn34b3Q80ZS5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn34b3Q80ZS5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms