Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bQ80YF6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.52■□□□□ 0.4
Upk3bQ80YF6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bQ80YF6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bQ80YF6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bQ80YF6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Upk3bQ80YF6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Upk3bQ80YF6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Upk3bQ80YF6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Upk3bQ80YF6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Upk3bQ80YF6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Upk3bQ80YF6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Upk3bQ80YF6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upk3bQ80YF6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk3bQ80YF6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk3bQ80YF6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Upk3bQ80YF6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Upk3bQ80YF6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Upk3bQ80YF6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.46■□□□□ 0.38
Upk3bQ80YF6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk3bQ80YF6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk3bQ80YF6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk3bQ80YF6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms