Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Vrk1Q80X41 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Vrk1Q80X41 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vrk1Q80X41 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vrk1Q80X41 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Vrk1Q80X41 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.83■□□□□ 0.77
Vrk1Q80X41 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vrk1Q80X41 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vrk1Q80X41 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vrk1Q80X41 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vrk1Q80X41 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vrk1Q80X41 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Vrk1Q80X41 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Vrk1Q80X41 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Vrk1Q80X41 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.81■□□□□ 0.76
Vrk1Q80X41 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Vrk1Q80X41 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vrk1Q80X41 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vrk1Q80X41 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vrk1Q80X41 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vrk1Q80X41 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.79■□□□□ 0.76
Vrk1Q80X41 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vrk1Q80X41 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vrk1Q80X41 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vrk1Q80X41 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vrk1Q80X41 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vrk1Q80X41 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Vrk1Q80X41 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.75■□□□□ 0.75
Vrk1Q80X41 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vrk1Q80X41 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vrk1Q80X41 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.74■□□□□ 0.75
Vrk1Q80X41 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vrk1Q80X41 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vrk1Q80X41 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vrk1Q80X41 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Vrk1Q80X41 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vrk1Q80X41 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Vrk1Q80X41 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.72■□□□□ 0.75
Vrk1Q80X41 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms