Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otop1Q80VM9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Otop1Q80VM9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.95■□□□□ 0.78
Otop1Q80VM9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otop1Q80VM9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.95■□□□□ 0.78
Otop1Q80VM9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otop1Q80VM9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otop1Q80VM9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otop1Q80VM9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Otop1Q80VM9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Otop1Q80VM9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.94■□□□□ 0.78
Otop1Q80VM9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Otop1Q80VM9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otop1Q80VM9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otop1Q80VM9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otop1Q80VM9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Otop1Q80VM9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otop1Q80VM9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
Otop1Q80VM9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Otop1Q80VM9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.93■□□□□ 0.78
Otop1Q80VM9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otop1Q80VM9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Otop1Q80VM9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.91■□□□□ 0.78
Otop1Q80VM9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Otop1Q80VM9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.9■□□□□ 0.78
Otop1Q80VM9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Otop1Q80VM9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otop1Q80VM9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otop1Q80VM9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Otop1Q80VM9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Otop1Q80VM9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.89■□□□□ 0.77
Otop1Q80VM9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.88■□□□□ 0.77
Otop1Q80VM9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Otop1Q80VM9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otop1Q80VM9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otop1Q80VM9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Otop1Q80VM9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otop1Q80VM9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.87■□□□□ 0.77
Otop1Q80VM9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Otop1Q80VM9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Otop1Q80VM9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Otop1Q80VM9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Otop1Q80VM9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Otop1Q80VM9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Otop1Q80VM9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otop1Q80VM9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Otop1Q80VM9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otop1Q80VM9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Otop1Q80VM9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otop1Q80VM9 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.85■□□□□ 0.77
Otop1Q80VM9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Otop1Q80VM9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Otop1Q80VM9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms