Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3tc2Q80VA5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3tc2Q80VA5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3tc2Q80VA5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3tc2Q80VA5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
Sh3tc2Q80VA5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3tc2Q80VA5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.65■■□□□ 1.22
Sh3tc2Q80VA5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3tc2Q80VA5 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.65■■□□□ 1.22
Sh3tc2Q80VA5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3tc2Q80VA5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.64■■□□□ 1.21
Sh3tc2Q80VA5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3tc2Q80VA5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3tc2Q80VA5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3tc2Q80VA5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3tc2Q80VA5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Sh3tc2Q80VA5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Gm6139-201ENSMUST00000079261 882 ntBASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3tc2Q80VA5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3tc2Q80VA5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3tc2Q80VA5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sh3tc2Q80VA5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3tc2Q80VA5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3tc2Q80VA5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3tc2Q80VA5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Sh3tc2Q80VA5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3tc2Q80VA5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3tc2Q80VA5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3tc2Q80VA5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3tc2Q80VA5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Sh3tc2Q80VA5 Gm29257-201ENSMUST00000186115 639 ntBASIC22.58■■□□□ 1.21
Sh3tc2Q80VA5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sh3tc2Q80VA5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sh3tc2Q80VA5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3tc2Q80VA5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3tc2Q80VA5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Sh3tc2Q80VA5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3tc2Q80VA5 Gm43137-201ENSMUST00000198052 594 ntBASIC22.55■■□□□ 1.2
Sh3tc2Q80VA5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3tc2Q80VA5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3tc2Q80VA5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Sh3tc2Q80VA5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3tc2Q80VA5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3tc2Q80VA5 Gm43017-201ENSMUST00000198296 752 ntBASIC22.53■■□□□ 1.2
Sh3tc2Q80VA5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.53■■□□□ 1.2
Sh3tc2Q80VA5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.52■■□□□ 1.2
Sh3tc2Q80VA5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms