Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ubr5Q80TP3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr5Q80TP3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.54■□□□□ 0.56
Ubr5Q80TP3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr5Q80TP3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr5Q80TP3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubr5Q80TP3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 AV356131-201ENSMUST00000206201 750 ntBASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.53■□□□□ 0.56
Ubr5Q80TP3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr5Q80TP3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr5Q80TP3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.52■□□□□ 0.56
Ubr5Q80TP3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.52■□□□□ 0.56
Ubr5Q80TP3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr5Q80TP3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubr5Q80TP3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ubr5Q80TP3 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.52■□□□□ 0.55
Ubr5Q80TP3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ubr5Q80TP3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr5Q80TP3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr5Q80TP3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr5Q80TP3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr5Q80TP3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.51■□□□□ 0.55
Ubr5Q80TP3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ubr5Q80TP3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.49■□□□□ 0.55
Ubr5Q80TP3 Gm40848-201ENSMUST00000221998 324 ntBASIC18.49■□□□□ 0.55
Ubr5Q80TP3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.48■□□□□ 0.55
Ubr5Q80TP3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr5Q80TP3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr5Q80TP3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ubr5Q80TP3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.47■□□□□ 0.55
Ubr5Q80TP3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.47■□□□□ 0.55
Ubr5Q80TP3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr5Q80TP3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.45■□□□□ 0.54
Ubr5Q80TP3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ubr5Q80TP3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr5Q80TP3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr5Q80TP3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.45■□□□□ 0.54
Ubr5Q80TP3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr5Q80TP3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ubr5Q80TP3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr5Q80TP3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr5Q80TP3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.43■□□□□ 0.54
Ubr5Q80TP3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.43■□□□□ 0.54
Ubr5Q80TP3 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.43■□□□□ 0.54
Ubr5Q80TP3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr5Q80TP3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr5Q80TP3 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.43■□□□□ 0.54
Ubr5Q80TP3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr5Q80TP3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms