Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh8Q7TSK3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh8Q7TSK3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh8Q7TSK3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.48■□□□□ 0.87
Pcdh8Q7TSK3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh8Q7TSK3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh8Q7TSK3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Pcdh8Q7TSK3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdh8Q7TSK3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh8Q7TSK3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdh8Q7TSK3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh8Q7TSK3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh8Q7TSK3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdh8Q7TSK3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdh8Q7TSK3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh8Q7TSK3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh8Q7TSK3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh8Q7TSK3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh8Q7TSK3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdh8Q7TSK3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdh8Q7TSK3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.39■□□□□ 0.85
Pcdh8Q7TSK3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh8Q7TSK3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms