Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC30.28■■■□□ 2.44
ShprhQ7TPQ3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ShprhQ7TPQ3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ShprhQ7TPQ3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
ShprhQ7TPQ3 Gm29257-201ENSMUST00000186115 639 ntBASIC30.27■■■□□ 2.44
ShprhQ7TPQ3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ShprhQ7TPQ3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
ShprhQ7TPQ3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC30.26■■■□□ 2.43
ShprhQ7TPQ3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ShprhQ7TPQ3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ShprhQ7TPQ3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ShprhQ7TPQ3 Wdr70-203ENSMUST00000227371 1130 ntBASIC30.24■■■□□ 2.43
ShprhQ7TPQ3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ShprhQ7TPQ3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Gm43759-201ENSMUST00000196925 1261 ntBASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ShprhQ7TPQ3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
ShprhQ7TPQ3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
ShprhQ7TPQ3 Gm5576-201ENSMUST00000075809 1236 ntBASIC30.21■■■□□ 2.43
ShprhQ7TPQ3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
ShprhQ7TPQ3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
ShprhQ7TPQ3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC30.2■■■□□ 2.43
ShprhQ7TPQ3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
ShprhQ7TPQ3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ShprhQ7TPQ3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
ShprhQ7TPQ3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
ShprhQ7TPQ3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC30.2■■■□□ 2.42
ShprhQ7TPQ3 Gm8493-201ENSMUST00000196881 489 ntBASIC30.2■■■□□ 2.42
ShprhQ7TPQ3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ShprhQ7TPQ3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
ShprhQ7TPQ3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC30.19■■■□□ 2.42
ShprhQ7TPQ3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
ShprhQ7TPQ3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ShprhQ7TPQ3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ShprhQ7TPQ3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ShprhQ7TPQ3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
ShprhQ7TPQ3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ShprhQ7TPQ3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
ShprhQ7TPQ3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 Gm43530-201ENSMUST00000195920 274 ntBASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 AC164629.5-201ENSMUST00000220387 632 ntBASIC30.17■■■□□ 2.42
ShprhQ7TPQ3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC30.16■■■□□ 2.42
ShprhQ7TPQ3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ShprhQ7TPQ3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ShprhQ7TPQ3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ShprhQ7TPQ3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC30.16■■■□□ 2.42
ShprhQ7TPQ3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ShprhQ7TPQ3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
ShprhQ7TPQ3 Spcs1-204ENSMUST00000226782 949 ntBASIC30.15■■■□□ 2.42
ShprhQ7TPQ3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
ShprhQ7TPQ3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ShprhQ7TPQ3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC30.13■■■□□ 2.41
ShprhQ7TPQ3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ShprhQ7TPQ3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ShprhQ7TPQ3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
ShprhQ7TPQ3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC30.12■■■□□ 2.41
ShprhQ7TPQ3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ShprhQ7TPQ3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
ShprhQ7TPQ3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ShprhQ7TPQ3 Gm26571-201ENSMUST00000181399 666 ntBASIC30.11■■■□□ 2.41
ShprhQ7TPQ3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
ShprhQ7TPQ3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
ShprhQ7TPQ3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ShprhQ7TPQ3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ShprhQ7TPQ3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC30.1■■■□□ 2.41
ShprhQ7TPQ3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ShprhQ7TPQ3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC30.1■■■□□ 2.41
ShprhQ7TPQ3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ShprhQ7TPQ3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ShprhQ7TPQ3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ShprhQ7TPQ3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ShprhQ7TPQ3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ShprhQ7TPQ3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ShprhQ7TPQ3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ShprhQ7TPQ3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ShprhQ7TPQ3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms