Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn4bQ7M729 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn4bQ7M729 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scn4bQ7M729 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Scn4bQ7M729 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn4bQ7M729 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Scn4bQ7M729 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn4bQ7M729 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn4bQ7M729 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.24■□□□□ 0.83
Scn4bQ7M729 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn4bQ7M729 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn4bQ7M729 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn4bQ7M729 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Scn4bQ7M729 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.23■□□□□ 0.83
Scn4bQ7M729 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn4bQ7M729 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.22■□□□□ 0.83
Scn4bQ7M729 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.22■□□□□ 0.83
Scn4bQ7M729 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn4bQ7M729 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Scn4bQ7M729 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn4bQ7M729 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Scn4bQ7M729 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn4bQ7M729 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scn4bQ7M729 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.21■□□□□ 0.83
Scn4bQ7M729 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn4bQ7M729 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn4bQ7M729 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn4bQ7M729 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn4bQ7M729 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Scn4bQ7M729 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn4bQ7M729 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn4bQ7M729 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn4bQ7M729 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn4bQ7M729 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn4bQ7M729 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Scn4bQ7M729 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn4bQ7M729 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn4bQ7M729 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn4bQ7M729 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scn4bQ7M729 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scn4bQ7M729 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Scn4bQ7M729 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn4bQ7M729 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn4bQ7M729 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn4bQ7M729 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn4bQ7M729 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn4bQ7M729 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn4bQ7M729 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn4bQ7M729 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Gm5812-201ENSMUST00000061073 957 ntBASIC20.15■□□□□ 0.82
Scn4bQ7M729 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.15■□□□□ 0.82
Scn4bQ7M729 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn4bQ7M729 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn4bQ7M729 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn4bQ7M729 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Scn4bQ7M729 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.13■□□□□ 0.81
Scn4bQ7M729 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms