Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc3Q64519 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc3Q64519 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Sdc3Q64519 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Sdc3Q64519 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc3Q64519 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc3Q64519 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc3Q64519 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Sdc3Q64519 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc3Q64519 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc3Q64519 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sdc3Q64519 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sdc3Q64519 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdc3Q64519 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc3Q64519 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc3Q64519 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc3Q64519 Gm22238-201ENSMUST00000175222 88 ntBASIC19.88■□□□□ 0.77
Sdc3Q64519 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Sdc3Q64519 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.88■□□□□ 0.77
Sdc3Q64519 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sdc3Q64519 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Sdc3Q64519 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Sdc3Q64519 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sdc3Q64519 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdc3Q64519 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc3Q64519 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc3Q64519 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Sdc3Q64519 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc3Q64519 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Sdc3Q64519 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc3Q64519 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc3Q64519 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sdc3Q64519 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.85■□□□□ 0.77
Sdc3Q64519 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc3Q64519 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc3Q64519 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Sdc3Q64519 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc3Q64519 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sdc3Q64519 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sdc3Q64519 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc3Q64519 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc3Q64519 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.83■□□□□ 0.77
Sdc3Q64519 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sdc3Q64519 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.83■□□□□ 0.77
Sdc3Q64519 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Sdc3Q64519 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc3Q64519 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Sdc3Q64519 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc3Q64519 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc3Q64519 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.81■□□□□ 0.76
Sdc3Q64519 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.81■□□□□ 0.76
Sdc3Q64519 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc3Q64519 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc3Q64519 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc3Q64519 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Sdc3Q64519 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc3Q64519 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.8■□□□□ 0.76
Sdc3Q64519 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.8■□□□□ 0.76
Sdc3Q64519 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sdc3Q64519 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc3Q64519 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc3Q64519 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc3Q64519 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.79■□□□□ 0.76
Sdc3Q64519 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc3Q64519 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc3Q64519 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc3Q64519 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc3Q64519 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.79■□□□□ 0.76
Sdc3Q64519 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sdc3Q64519 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sdc3Q64519 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sdc3Q64519 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc3Q64519 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc3Q64519 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc3Q64519 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sdc3Q64519 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.78■□□□□ 0.76
Sdc3Q64519 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sdc3Q64519 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms