Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AtmQ62388 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
AtmQ62388 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AtmQ62388 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AtmQ62388 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.12■□□□□ 0.81
AtmQ62388 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AtmQ62388 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.11■□□□□ 0.81
AtmQ62388 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.11■□□□□ 0.81
AtmQ62388 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AtmQ62388 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
AtmQ62388 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.1■□□□□ 0.81
AtmQ62388 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AtmQ62388 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.09■□□□□ 0.81
AtmQ62388 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
AtmQ62388 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AtmQ62388 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AtmQ62388 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
AtmQ62388 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AtmQ62388 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.09■□□□□ 0.81
AtmQ62388 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AtmQ62388 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
AtmQ62388 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AtmQ62388 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
AtmQ62388 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AtmQ62388 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AtmQ62388 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.08■□□□□ 0.8
AtmQ62388 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AtmQ62388 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
AtmQ62388 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.07■□□□□ 0.8
AtmQ62388 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AtmQ62388 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AtmQ62388 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AtmQ62388 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
AtmQ62388 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
AtmQ62388 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AtmQ62388 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AtmQ62388 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AtmQ62388 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AtmQ62388 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AtmQ62388 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
AtmQ62388 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AtmQ62388 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.04■□□□□ 0.8
AtmQ62388 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
AtmQ62388 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AtmQ62388 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AtmQ62388 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AtmQ62388 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.04■□□□□ 0.8
AtmQ62388 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AtmQ62388 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AtmQ62388 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AtmQ62388 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AtmQ62388 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
AtmQ62388 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AtmQ62388 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.03■□□□□ 0.8
AtmQ62388 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.03■□□□□ 0.8
AtmQ62388 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
AtmQ62388 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AtmQ62388 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AtmQ62388 Gm9870-201ENSMUST00000063874 645 ntBASIC20.02■□□□□ 0.8
AtmQ62388 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AtmQ62388 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
AtmQ62388 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.02■□□□□ 0.8
AtmQ62388 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AtmQ62388 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.02■□□□□ 0.79
AtmQ62388 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AtmQ62388 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AtmQ62388 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.01■□□□□ 0.79
AtmQ62388 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.01■□□□□ 0.79
AtmQ62388 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AtmQ62388 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.01■□□□□ 0.79
AtmQ62388 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.01■□□□□ 0.79
AtmQ62388 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20■□□□□ 0.79
AtmQ62388 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20■□□□□ 0.79
AtmQ62388 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20■□□□□ 0.79
AtmQ62388 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AtmQ62388 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20■□□□□ 0.79
AtmQ62388 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AtmQ62388 Gm10252-201ENSMUST00000209541 832 ntBASIC19.99■□□□□ 0.79
AtmQ62388 Gm10033-202ENSMUST00000211874 928 ntBASIC19.99■□□□□ 0.79
AtmQ62388 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms