Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox16Q62247 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox16Q62247 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox16Q62247 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox16Q62247 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox16Q62247 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox16Q62247 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox16Q62247 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Sox16Q62247 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Gm38342-201ENSMUST00000195710 2980 ntBASIC11.93□□□□□ -0.5
Sox16Q62247 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox16Q62247 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox16Q62247 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC11.93□□□□□ -0.5
Sox16Q62247 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.93□□□□□ -0.5
Sox16Q62247 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox16Q62247 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox16Q62247 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Sox16Q62247 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Sox16Q62247 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox16Q62247 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox16Q62247 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Sox16Q62247 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox16Q62247 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox16Q62247 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox16Q62247 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox16Q62247 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox16Q62247 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox16Q62247 Haglr-201ENSMUST00000100000 2085 ntBASIC11.9□□□□□ -0.51
Sox16Q62247 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox16Q62247 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Sox16Q62247 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Sox16Q62247 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox16Q62247 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.88□□□□□ -0.51
Sox16Q62247 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox16Q62247 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox16Q62247 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox16Q62247 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox16Q62247 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sox16Q62247 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox16Q62247 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox16Q62247 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox16Q62247 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox16Q62247 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox16Q62247 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sox16Q62247 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms