Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.26■□□□□ 0.51
Traf4Q61382 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Traf4Q61382 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Traf4Q61382 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Traf4Q61382 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Traf4Q61382 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Traf4Q61382 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Traf4Q61382 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Traf4Q61382 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Traf4Q61382 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Traf4Q61382 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Traf4Q61382 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Traf4Q61382 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Traf4Q61382 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
Traf4Q61382 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.24■□□□□ 0.51
Traf4Q61382 Gm7417-201ENSMUST00000192950 473 ntBASIC18.24■□□□□ 0.51
Traf4Q61382 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Traf4Q61382 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Traf4Q61382 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Traf4Q61382 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Traf4Q61382 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.23■□□□□ 0.51
Traf4Q61382 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Traf4Q61382 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Traf4Q61382 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.22■□□□□ 0.51
Traf4Q61382 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.22■□□□□ 0.51
Traf4Q61382 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.22■□□□□ 0.51
Traf4Q61382 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Traf4Q61382 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Traf4Q61382 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.22■□□□□ 0.51
Traf4Q61382 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Traf4Q61382 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Traf4Q61382 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.21■□□□□ 0.51
Traf4Q61382 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.21■□□□□ 0.51
Traf4Q61382 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.21■□□□□ 0.51
Traf4Q61382 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.21■□□□□ 0.51
Traf4Q61382 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Traf4Q61382 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Traf4Q61382 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Traf4Q61382 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Traf4Q61382 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.2■□□□□ 0.5
Traf4Q61382 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.2■□□□□ 0.5
Traf4Q61382 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Traf4Q61382 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.19■□□□□ 0.5
Traf4Q61382 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.19■□□□□ 0.5
Traf4Q61382 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Traf4Q61382 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.19■□□□□ 0.5
Traf4Q61382 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Traf4Q61382 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.19■□□□□ 0.5
Traf4Q61382 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Traf4Q61382 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.18■□□□□ 0.5
Traf4Q61382 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Traf4Q61382 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.18■□□□□ 0.5
Traf4Q61382 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.18■□□□□ 0.5
Traf4Q61382 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.18■□□□□ 0.5
Traf4Q61382 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Traf4Q61382 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Traf4Q61382 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.17■□□□□ 0.5
Traf4Q61382 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
Traf4Q61382 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.17■□□□□ 0.5
Traf4Q61382 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Traf4Q61382 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.16■□□□□ 0.5
Traf4Q61382 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms