Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sim1Q61045 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sim1Q61045 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sim1Q61045 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sim1Q61045 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sim1Q61045 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sim1Q61045 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sim1Q61045 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sim1Q61045 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
Sim1Q61045 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sim1Q61045 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Sim1Q61045 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sim1Q61045 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sim1Q61045 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sim1Q61045 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sim1Q61045 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sim1Q61045 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
Sim1Q61045 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Sim1Q61045 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sim1Q61045 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sim1Q61045 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sim1Q61045 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Sim1Q61045 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sim1Q61045 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sim1Q61045 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sim1Q61045 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.59■□□□□ 0.89
Sim1Q61045 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sim1Q61045 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sim1Q61045 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sim1Q61045 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sim1Q61045 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Sim1Q61045 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sim1Q61045 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sim1Q61045 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sim1Q61045 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sim1Q61045 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.58■□□□□ 0.89
Sim1Q61045 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sim1Q61045 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sim1Q61045 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sim1Q61045 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sim1Q61045 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sim1Q61045 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sim1Q61045 Gm18284-201ENSMUST00000172604 624 ntBASIC20.57■□□□□ 0.88
Sim1Q61045 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sim1Q61045 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.57■□□□□ 0.88
Sim1Q61045 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sim1Q61045 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sim1Q61045 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sim1Q61045 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sim1Q61045 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.56■□□□□ 0.88
Sim1Q61045 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.55■□□□□ 0.88
Sim1Q61045 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.55■□□□□ 0.88
Sim1Q61045 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sim1Q61045 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sim1Q61045 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Sim1Q61045 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sim1Q61045 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
Sim1Q61045 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sim1Q61045 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sim1Q61045 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sim1Q61045 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.52■□□□□ 0.88
Sim1Q61045 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sim1Q61045 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sim1Q61045 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms