Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrcc1Q60596 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Xrcc1Q60596 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.87■□□□□ 0.77
Xrcc1Q60596 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xrcc1Q60596 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Xrcc1Q60596 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.86■□□□□ 0.77
Xrcc1Q60596 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.86■□□□□ 0.77
Xrcc1Q60596 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xrcc1Q60596 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Xrcc1Q60596 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Xrcc1Q60596 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Xrcc1Q60596 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Xrcc1Q60596 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Xrcc1Q60596 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Xrcc1Q60596 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Xrcc1Q60596 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Xrcc1Q60596 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.83■□□□□ 0.77
Xrcc1Q60596 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Xrcc1Q60596 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.83■□□□□ 0.77
Xrcc1Q60596 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Xrcc1Q60596 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Xrcc1Q60596 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.83■□□□□ 0.76
Xrcc1Q60596 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Xrcc1Q60596 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Xrcc1Q60596 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Xrcc1Q60596 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.82■□□□□ 0.76
Xrcc1Q60596 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Xrcc1Q60596 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Xrcc1Q60596 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Xrcc1Q60596 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.8■□□□□ 0.76
Xrcc1Q60596 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Xrcc1Q60596 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Xrcc1Q60596 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.8■□□□□ 0.76
Xrcc1Q60596 Gm22238-201ENSMUST00000175222 88 ntBASIC19.8■□□□□ 0.76
Xrcc1Q60596 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Xrcc1Q60596 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Xrcc1Q60596 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Xrcc1Q60596 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Xrcc1Q60596 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Xrcc1Q60596 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Xrcc1Q60596 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.77■□□□□ 0.76
Xrcc1Q60596 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Xrcc1Q60596 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Xrcc1Q60596 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.76■□□□□ 0.75
Xrcc1Q60596 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xrcc1Q60596 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 789.1 ms