Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.36■□□□□ 0.53
Trav6-2Q5R1I4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav6-2Q5R1I4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-2Q5R1I4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trav6-2Q5R1I4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-2Q5R1I4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-2Q5R1I4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-2Q5R1I4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-2Q5R1I4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav6-2Q5R1I4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-2Q5R1I4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Trav6-2Q5R1I4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-2Q5R1I4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Gm43137-201ENSMUST00000198052 594 ntBASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-2Q5R1I4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-2Q5R1I4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Trav6-2Q5R1I4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.31■□□□□ 0.52
Trav6-2Q5R1I4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-2Q5R1I4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-2Q5R1I4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trav6-2Q5R1I4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-2Q5R1I4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-2Q5R1I4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav6-2Q5R1I4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-2Q5R1I4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-2Q5R1I4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-2Q5R1I4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-2Q5R1I4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-2Q5R1I4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.28■□□□□ 0.52
Trav6-2Q5R1I4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6-2Q5R1I4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.28■□□□□ 0.52
Trav6-2Q5R1I4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-2Q5R1I4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Mir7075-201ENSMUST00000184187 82 ntBASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Gm6139-201ENSMUST00000079261 882 ntBASIC18.27■□□□□ 0.52
Trav6-2Q5R1I4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Trav6-2Q5R1I4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-2Q5R1I4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-2Q5R1I4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-2Q5R1I4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 230.8 ms