Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Gm9812-201ENSMUST00000061934 968 ntBASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-4Q5R1H9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-4Q5R1H9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav7d-4Q5R1H9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-4Q5R1H9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-4Q5R1H9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-4Q5R1H9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.77■□□□□ 0.12
Trav7d-4Q5R1H9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-4Q5R1H9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-4Q5R1H9 Terc-201ENSMUST00000082862 423 ntBASIC15.77■□□□□ 0.12
Trav7d-4Q5R1H9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7d-4Q5R1H9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7d-4Q5R1H9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7d-4Q5R1H9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-4Q5R1H9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Gm4799-201ENSMUST00000095396 657 ntBASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-4Q5R1H9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.74■□□□□ 0.11
Trav7d-4Q5R1H9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms