Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm12253Q5NC48 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12253Q5NC48 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12253Q5NC48 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12253Q5NC48 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Gm12253Q5NC48 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Gm12253Q5NC48 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.89■□□□□ 0.45
Gm12253Q5NC48 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.89■□□□□ 0.45
Gm12253Q5NC48 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12253Q5NC48 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Gm12253Q5NC48 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm12253Q5NC48 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12253Q5NC48 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.88■□□□□ 0.45
Gm12253Q5NC48 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12253Q5NC48 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12253Q5NC48 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Gm12253Q5NC48 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12253Q5NC48 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.85■□□□□ 0.45
Gm12253Q5NC48 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12253Q5NC48 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12253Q5NC48 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12253Q5NC48 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12253Q5NC48 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
Gm12253Q5NC48 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12253Q5NC48 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm12253Q5NC48 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm12253Q5NC48 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12253Q5NC48 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm12253Q5NC48 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12253Q5NC48 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm12253Q5NC48 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm12253Q5NC48 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms