Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Herc2Q4U2R1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Herc2Q4U2R1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Herc2Q4U2R1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Herc2Q4U2R1 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.88□□□□□ -0.35
Herc2Q4U2R1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Herc2Q4U2R1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.87□□□□□ -0.35
Herc2Q4U2R1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Gm13168-201ENSMUST00000121771 632 ntBASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Herc2Q4U2R1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.85□□□□□ -0.35
Herc2Q4U2R1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Herc2Q4U2R1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Herc2Q4U2R1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC12.83□□□□□ -0.35
Herc2Q4U2R1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC12.83□□□□□ -0.36
Herc2Q4U2R1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Herc2Q4U2R1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Herc2Q4U2R1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Herc2Q4U2R1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Herc2Q4U2R1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Herc2Q4U2R1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Smad6-203ENSMUST00000179458 273 ntBASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Herc2Q4U2R1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC12.81□□□□□ -0.36
Herc2Q4U2R1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc2Q4U2R1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc2Q4U2R1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Gm42778-201ENSMUST00000199644 553 ntBASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms