Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Gm27011-201ENSMUST00000182352 972 ntBASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Defb28Q3V2L0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Defb28Q3V2L0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Defb28Q3V2L0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Defb28Q3V2L0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Defb28Q3V2L0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Defb28Q3V2L0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Gm10849-201ENSMUST00000100397 618 ntBASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defb28Q3V2L0 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.25■□□□□ 0.83
Defb28Q3V2L0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Defb28Q3V2L0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Defb28Q3V2L0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Defb28Q3V2L0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Defb28Q3V2L0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Defb28Q3V2L0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Defb28Q3V2L0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Defb28Q3V2L0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Defb28Q3V2L0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Defb28Q3V2L0 Spcs1-204ENSMUST00000226782 949 ntBASIC20.23■□□□□ 0.83
Defb28Q3V2L0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Defb28Q3V2L0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Defb28Q3V2L0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Defb28Q3V2L0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Defb28Q3V2L0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Defb28Q3V2L0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Gm40848-201ENSMUST00000221998 324 ntBASIC20.19■□□□□ 0.82
Defb28Q3V2L0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Defb28Q3V2L0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Defb28Q3V2L0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Gm18671-201ENSMUST00000214826 683 ntBASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Defb28Q3V2L0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Defb28Q3V2L0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Defb28Q3V2L0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Defb28Q3V2L0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Defb28Q3V2L0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Defb28Q3V2L0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Defb28Q3V2L0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms