Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim40Q3UWA4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim40Q3UWA4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim40Q3UWA4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim40Q3UWA4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim40Q3UWA4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim40Q3UWA4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim40Q3UWA4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim40Q3UWA4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.43■□□□□ 0.7
Trim40Q3UWA4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim40Q3UWA4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim40Q3UWA4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim40Q3UWA4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim40Q3UWA4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim40Q3UWA4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Trim40Q3UWA4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Gm6311-201ENSMUST00000073790 878 ntBASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim40Q3UWA4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim40Q3UWA4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim40Q3UWA4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim40Q3UWA4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim40Q3UWA4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim40Q3UWA4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim40Q3UWA4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Gm44428-201ENSMUST00000204474 874 ntBASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim40Q3UWA4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim40Q3UWA4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim40Q3UWA4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
Trim40Q3UWA4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim40Q3UWA4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trim40Q3UWA4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim40Q3UWA4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim40Q3UWA4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Trim40Q3UWA4 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.33■□□□□ 0.68
Trim40Q3UWA4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trim40Q3UWA4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim40Q3UWA4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms