Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.92■□□□□ 0.46
Shisa3Q3UPR0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa3Q3UPR0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa3Q3UPR0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Gm7332-201ENSMUST00000118351 454 ntBASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa3Q3UPR0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Shisa3Q3UPR0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shisa3Q3UPR0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa3Q3UPR0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa3Q3UPR0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shisa3Q3UPR0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.87■□□□□ 0.45
Shisa3Q3UPR0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.87■□□□□ 0.45
Shisa3Q3UPR0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa3Q3UPR0 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.87■□□□□ 0.45
Shisa3Q3UPR0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa3Q3UPR0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa3Q3UPR0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa3Q3UPR0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.84■□□□□ 0.45
Shisa3Q3UPR0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa3Q3UPR0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Shisa3Q3UPR0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa3Q3UPR0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Shisa3Q3UPR0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms