Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 Golgb1-201ENSMUST00000023534 498 ntBASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Naf1Q3UMQ8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Naf1Q3UMQ8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Naf1Q3UMQ8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.16■□□□□ 0.98
Naf1Q3UMQ8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Naf1Q3UMQ8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Naf1Q3UMQ8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Naf1Q3UMQ8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Naf1Q3UMQ8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.14■□□□□ 0.98
Naf1Q3UMQ8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Naf1Q3UMQ8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Naf1Q3UMQ8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Naf1Q3UMQ8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.12■□□□□ 0.97
Naf1Q3UMQ8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Naf1Q3UMQ8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Naf1Q3UMQ8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Naf1Q3UMQ8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Naf1Q3UMQ8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Naf1Q3UMQ8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Naf1Q3UMQ8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Naf1Q3UMQ8 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.11■□□□□ 0.97
Naf1Q3UMQ8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Naf1Q3UMQ8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Naf1Q3UMQ8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Naf1Q3UMQ8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Naf1Q3UMQ8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Naf1Q3UMQ8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Naf1Q3UMQ8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Naf1Q3UMQ8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Naf1Q3UMQ8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Naf1Q3UMQ8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Naf1Q3UMQ8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Naf1Q3UMQ8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.08■□□□□ 0.97
Naf1Q3UMQ8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.08■□□□□ 0.97
Naf1Q3UMQ8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Naf1Q3UMQ8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Naf1Q3UMQ8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Naf1Q3UMQ8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Naf1Q3UMQ8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Naf1Q3UMQ8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Naf1Q3UMQ8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.07■□□□□ 0.96
Naf1Q3UMQ8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Naf1Q3UMQ8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Naf1Q3UMQ8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Naf1Q3UMQ8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Naf1Q3UMQ8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.06■□□□□ 0.96
Naf1Q3UMQ8 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.06■□□□□ 0.96
Naf1Q3UMQ8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Naf1Q3UMQ8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms