Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smu1Q3UKJ7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Smu1Q3UKJ7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smu1Q3UKJ7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smu1Q3UKJ7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smu1Q3UKJ7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smu1Q3UKJ7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smu1Q3UKJ7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smu1Q3UKJ7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smu1Q3UKJ7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smu1Q3UKJ7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smu1Q3UKJ7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smu1Q3UKJ7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smu1Q3UKJ7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smu1Q3UKJ7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smu1Q3UKJ7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smu1Q3UKJ7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smu1Q3UKJ7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smu1Q3UKJ7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smu1Q3UKJ7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.83■□□□□ 0.77
Smu1Q3UKJ7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smu1Q3UKJ7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smu1Q3UKJ7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smu1Q3UKJ7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smu1Q3UKJ7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smu1Q3UKJ7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms