Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pkd1l3Q2EG98 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pkd1l3Q2EG98 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pkd1l3Q2EG98 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.7■□□□□ 0.58
Pkd1l3Q2EG98 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pkd1l3Q2EG98 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 Gm12821-201ENSMUST00000120022 600 ntBASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd1l3Q2EG98 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pkd1l3Q2EG98 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.67■□□□□ 0.58
Pkd1l3Q2EG98 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd1l3Q2EG98 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd1l3Q2EG98 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd1l3Q2EG98 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l3Q2EG98 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l3Q2EG98 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pkd1l3Q2EG98 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pkd1l3Q2EG98 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Pkd1l3Q2EG98 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd1l3Q2EG98 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.63■□□□□ 0.57
Pkd1l3Q2EG98 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.63■□□□□ 0.57
Pkd1l3Q2EG98 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd1l3Q2EG98 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd1l3Q2EG98 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pkd1l3Q2EG98 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pkd1l3Q2EG98 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pkd1l3Q2EG98 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pkd1l3Q2EG98 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1l3Q2EG98 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pkd1l3Q2EG98 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pkd1l3Q2EG98 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.59■□□□□ 0.57
Pkd1l3Q2EG98 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms