Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm11687-201ENSMUST00000118911 886 ntBASIC17.76■□□□□ 0.43
Smn1P97801 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.76■□□□□ 0.43
Smn1P97801 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smn1P97801 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Smn1P97801 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smn1P97801 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smn1P97801 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smn1P97801 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smn1P97801 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smn1P97801 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.74■□□□□ 0.43
Smn1P97801 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smn1P97801 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smn1P97801 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.73■□□□□ 0.43
Smn1P97801 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smn1P97801 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.73■□□□□ 0.43
Smn1P97801 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.73■□□□□ 0.43
Smn1P97801 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smn1P97801 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.72■□□□□ 0.43
Smn1P97801 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.72■□□□□ 0.43
Smn1P97801 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Smn1P97801 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smn1P97801 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.71■□□□□ 0.43
Smn1P97801 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.71■□□□□ 0.43
Smn1P97801 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smn1P97801 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smn1P97801 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smn1P97801 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.7■□□□□ 0.42
Smn1P97801 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smn1P97801 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smn1P97801 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smn1P97801 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smn1P97801 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smn1P97801 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smn1P97801 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.69■□□□□ 0.42
Smn1P97801 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smn1P97801 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
Smn1P97801 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Smn1P97801 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.68■□□□□ 0.42
Smn1P97801 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.68■□□□□ 0.42
Smn1P97801 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smn1P97801 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smn1P97801 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smn1P97801 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smn1P97801 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smn1P97801 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smn1P97801 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.67■□□□□ 0.42
Smn1P97801 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smn1P97801 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smn1P97801 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smn1P97801 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms