Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim43bP86448 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim43bP86448 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim43bP86448 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim43bP86448 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim43bP86448 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim43bP86448 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim43bP86448 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim43bP86448 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim43bP86448 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim43bP86448 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim43bP86448 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim43bP86448 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim43bP86448 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim43bP86448 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim43bP86448 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43bP86448 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43bP86448 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim43bP86448 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43bP86448 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim43bP86448 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43bP86448 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim43bP86448 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43bP86448 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43bP86448 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43bP86448 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trim43bP86448 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43bP86448 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trim43bP86448 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Trim43bP86448 Gm15546-201ENSMUST00000122095 826 ntBASIC21.22■□□□□ 0.99
Trim43bP86448 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim43bP86448 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim43bP86448 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43bP86448 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43bP86448 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43bP86448 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43bP86448 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43bP86448 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43bP86448 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43bP86448 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim43bP86448 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim43bP86448 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim43bP86448 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Trim43bP86448 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43bP86448 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trim43bP86448 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43bP86448 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.19■□□□□ 0.98
Trim43bP86448 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim43bP86448 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trim43bP86448 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43bP86448 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43bP86448 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim43bP86448 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43bP86448 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43bP86448 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.19■□□□□ 0.98
Trim43bP86448 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43bP86448 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43bP86448 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.18■□□□□ 0.98
Trim43bP86448 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43bP86448 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.17■□□□□ 0.98
Trim43bP86448 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43bP86448 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43bP86448 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43bP86448 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43bP86448 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim43bP86448 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43bP86448 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim43bP86448 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trim43bP86448 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.16■□□□□ 0.98
Trim43bP86448 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trim43bP86448 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim43bP86448 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43bP86448 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms