Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gbx1P82976 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gbx1P82976 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.49■□□□□ 0.71
Gbx1P82976 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gbx1P82976 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gbx1P82976 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gbx1P82976 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.48■□□□□ 0.71
Gbx1P82976 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gbx1P82976 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gbx1P82976 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Gbx1P82976 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gbx1P82976 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gbx1P82976 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.48■□□□□ 0.71
Gbx1P82976 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gbx1P82976 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gbx1P82976 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gbx1P82976 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gbx1P82976 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gbx1P82976 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gbx1P82976 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gbx1P82976 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Gbx1P82976 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Gbx1P82976 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gbx1P82976 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gbx1P82976 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gbx1P82976 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.45■□□□□ 0.7
Gbx1P82976 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.45■□□□□ 0.7
Gbx1P82976 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.45■□□□□ 0.7
Gbx1P82976 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gbx1P82976 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gbx1P82976 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gbx1P82976 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.43■□□□□ 0.7
Gbx1P82976 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.43■□□□□ 0.7
Gbx1P82976 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gbx1P82976 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gbx1P82976 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.43■□□□□ 0.7
Gbx1P82976 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Gbx1P82976 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gbx1P82976 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.42■□□□□ 0.7
Gbx1P82976 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.42■□□□□ 0.7
Gbx1P82976 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Gbx1P82976 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gbx1P82976 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gbx1P82976 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.41■□□□□ 0.7
Gbx1P82976 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.41■□□□□ 0.7
Gbx1P82976 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.41■□□□□ 0.7
Gbx1P82976 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.41■□□□□ 0.7
Gbx1P82976 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gbx1P82976 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gbx1P82976 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms