Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcbP82349 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcbP82349 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SgcbP82349 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.52■□□□□ 0.56
SgcbP82349 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcbP82349 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.52■□□□□ 0.56
SgcbP82349 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcbP82349 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SgcbP82349 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SgcbP82349 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcbP82349 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcbP82349 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcbP82349 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.51■□□□□ 0.55
SgcbP82349 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.51■□□□□ 0.55
SgcbP82349 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SgcbP82349 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SgcbP82349 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.5■□□□□ 0.55
SgcbP82349 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcbP82349 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcbP82349 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcbP82349 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcbP82349 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SgcbP82349 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcbP82349 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcbP82349 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcbP82349 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.48■□□□□ 0.55
SgcbP82349 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SgcbP82349 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcbP82349 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SgcbP82349 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcbP82349 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SgcbP82349 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.46■□□□□ 0.55
SgcbP82349 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SgcbP82349 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SgcbP82349 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.46■□□□□ 0.55
SgcbP82349 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SgcbP82349 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SgcbP82349 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SgcbP82349 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SgcbP82349 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SgcbP82349 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcbP82349 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.44■□□□□ 0.54
SgcbP82349 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.44■□□□□ 0.54
SgcbP82349 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SgcbP82349 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcbP82349 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SgcbP82349 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.43■□□□□ 0.54
SgcbP82349 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SgcbP82349 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SgcbP82349 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcbP82349 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.43■□□□□ 0.54
SgcbP82349 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SgcbP82349 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.43■□□□□ 0.54
SgcbP82349 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.43■□□□□ 0.54
SgcbP82349 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcbP82349 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SgcbP82349 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcbP82349 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SgcbP82349 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SgcbP82349 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.42■□□□□ 0.54
SgcbP82349 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.42■□□□□ 0.54
SgcbP82349 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SgcbP82349 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SgcbP82349 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SgcbP82349 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms