Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.71■□□□□ 0.91
Ldb1P70662 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ldb1P70662 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ldb1P70662 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb1P70662 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb1P70662 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb1P70662 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb1P70662 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.7■□□□□ 0.9
Ldb1P70662 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ldb1P70662 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb1P70662 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.69■□□□□ 0.9
Ldb1P70662 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb1P70662 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Ldb1P70662 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ldb1P70662 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb1P70662 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb1P70662 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ldb1P70662 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb1P70662 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb1P70662 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb1P70662 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ldb1P70662 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ldb1P70662 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ldb1P70662 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
Ldb1P70662 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ldb1P70662 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ldb1P70662 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.66■□□□□ 0.9
Ldb1P70662 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ldb1P70662 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ldb1P70662 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb1P70662 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ldb1P70662 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb1P70662 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb1P70662 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb1P70662 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.65■□□□□ 0.9
Ldb1P70662 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb1P70662 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ldb1P70662 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ldb1P70662 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ldb1P70662 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ldb1P70662 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ldb1P70662 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ldb1P70662 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Ldb1P70662 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb1P70662 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb1P70662 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.63■□□□□ 0.89
Ldb1P70662 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.63■□□□□ 0.89
Ldb1P70662 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb1P70662 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ldb1P70662 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ldb1P70662 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ldb1P70662 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.62■□□□□ 0.89
Ldb1P70662 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.62■□□□□ 0.89
Ldb1P70662 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
Ldb1P70662 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ldb1P70662 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Ldb1P70662 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.61■□□□□ 0.89
Ldb1P70662 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Gm10232-201ENSMUST00000089221 720 ntBASIC20.61■□□□□ 0.89
Ldb1P70662 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb1P70662 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ldb1P70662 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ldb1P70662 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ldb1P70662 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb1P70662 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ldb1P70662 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ldb1P70662 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms