Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cks1bP61025 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.65□□□□□ -0.06
Cks1bP61025 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cks1bP61025 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cks1bP61025 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.65□□□□□ -0.06
Cks1bP61025 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.65□□□□□ -0.06
Cks1bP61025 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cks1bP61025 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cks1bP61025 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.65□□□□□ -0.06
Cks1bP61025 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1bP61025 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cks1bP61025 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cks1bP61025 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1bP61025 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cks1bP61025 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.64□□□□□ -0.07
Cks1bP61025 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1bP61025 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1bP61025 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.63□□□□□ -0.07
Cks1bP61025 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.63□□□□□ -0.07
Cks1bP61025 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cks1bP61025 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1bP61025 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cks1bP61025 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
Cks1bP61025 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Cks1bP61025 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.62□□□□□ -0.07
Cks1bP61025 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1bP61025 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cks1bP61025 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.61□□□□□ -0.07
Cks1bP61025 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cks1bP61025 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cks1bP61025 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cks1bP61025 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cks1bP61025 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cks1bP61025 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.6□□□□□ -0.07
Cks1bP61025 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cks1bP61025 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cks1bP61025 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Golph3-202ENSMUST00000226517 2359 ntBASIC14.59□□□□□ -0.07
Cks1bP61025 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.59□□□□□ -0.07
Cks1bP61025 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.59□□□□□ -0.07
Cks1bP61025 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.59□□□□□ -0.07
Cks1bP61025 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.59□□□□□ -0.07
Cks1bP61025 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.59□□□□□ -0.07
Cks1bP61025 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cks1bP61025 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cks1bP61025 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cks1bP61025 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms