Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm40881-201ENSMUST00000223397 166 ntBASIC20.83■□□□□ 0.93
Lim2P56563 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lim2P56563 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lim2P56563 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lim2P56563 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lim2P56563 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lim2P56563 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.82■□□□□ 0.92
Lim2P56563 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lim2P56563 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.82■□□□□ 0.92
Lim2P56563 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.82■□□□□ 0.92
Lim2P56563 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.82■□□□□ 0.92
Lim2P56563 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lim2P56563 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Lim2P56563 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.81■□□□□ 0.92
Lim2P56563 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lim2P56563 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lim2P56563 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.81■□□□□ 0.92
Lim2P56563 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lim2P56563 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lim2P56563 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.81■□□□□ 0.92
Lim2P56563 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Lim2P56563 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lim2P56563 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.8■□□□□ 0.92
Lim2P56563 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lim2P56563 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lim2P56563 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.8■□□□□ 0.92
Lim2P56563 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lim2P56563 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lim2P56563 Gm7417-201ENSMUST00000192950 473 ntBASIC20.79■□□□□ 0.92
Lim2P56563 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.79■□□□□ 0.92
Lim2P56563 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lim2P56563 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lim2P56563 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lim2P56563 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lim2P56563 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.78■□□□□ 0.92
Lim2P56563 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lim2P56563 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lim2P56563 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lim2P56563 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.77■□□□□ 0.92
Lim2P56563 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lim2P56563 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.77■□□□□ 0.91
Lim2P56563 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lim2P56563 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lim2P56563 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lim2P56563 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Lim2P56563 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lim2P56563 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lim2P56563 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.76■□□□□ 0.91
Lim2P56563 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Lim2P56563 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lim2P56563 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lim2P56563 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lim2P56563 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Lim2P56563 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lim2P56563 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lim2P56563 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lim2P56563 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.75■□□□□ 0.91
Lim2P56563 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.75■□□□□ 0.91
Lim2P56563 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lim2P56563 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lim2P56563 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Lim2P56563 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lim2P56563 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.74■□□□□ 0.91
Lim2P56563 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.74■□□□□ 0.91
Lim2P56563 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lim2P56563 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lim2P56563 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lim2P56563 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lim2P56563 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lim2P56563 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.73■□□□□ 0.91
Lim2P56563 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lim2P56563 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lim2P56563 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lim2P56563 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Lim2P56563 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lim2P56563 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lim2P56563 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lim2P56563 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Lim2P56563 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lim2P56563 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lim2P56563 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lim2P56563 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms