Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
NcanP55066 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NcanP55066 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.47■■□□□ 1.19
NcanP55066 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.47■■□□□ 1.19
NcanP55066 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.47■■□□□ 1.19
NcanP55066 Mir7071-201ENSMUST00000184847 69 ntBASIC22.47■■□□□ 1.19
NcanP55066 Gm40848-201ENSMUST00000221998 324 ntBASIC22.47■■□□□ 1.19
NcanP55066 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NcanP55066 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
NcanP55066 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NcanP55066 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NcanP55066 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NcanP55066 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.46■■□□□ 1.19
NcanP55066 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NcanP55066 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
NcanP55066 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
NcanP55066 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.45■■□□□ 1.18
NcanP55066 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NcanP55066 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NcanP55066 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NcanP55066 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.45■■□□□ 1.18
NcanP55066 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NcanP55066 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NcanP55066 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
NcanP55066 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.44■■□□□ 1.18
NcanP55066 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NcanP55066 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.43■■□□□ 1.18
NcanP55066 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NcanP55066 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NcanP55066 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NcanP55066 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NcanP55066 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.43■■□□□ 1.18
NcanP55066 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NcanP55066 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
NcanP55066 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.42■■□□□ 1.18
NcanP55066 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.42■■□□□ 1.18
NcanP55066 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.42■■□□□ 1.18
NcanP55066 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NcanP55066 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NcanP55066 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NcanP55066 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NcanP55066 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NcanP55066 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NcanP55066 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.42■■□□□ 1.18
NcanP55066 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NcanP55066 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NcanP55066 Nespas-201ENSMUST00000143738 1083 ntBASIC22.41■■□□□ 1.18
NcanP55066 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.41■■□□□ 1.18
NcanP55066 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.41■■□□□ 1.18
NcanP55066 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NcanP55066 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
NcanP55066 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.4■■□□□ 1.18
NcanP55066 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.4■■□□□ 1.18
NcanP55066 Gm10252-201ENSMUST00000209541 832 ntBASIC22.4■■□□□ 1.18
NcanP55066 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.4■■□□□ 1.18
NcanP55066 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NcanP55066 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NcanP55066 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.4■■□□□ 1.18
NcanP55066 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NcanP55066 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.39■■□□□ 1.17
NcanP55066 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.39■■□□□ 1.17
NcanP55066 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.39■■□□□ 1.17
NcanP55066 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
NcanP55066 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NcanP55066 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.38■■□□□ 1.17
NcanP55066 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NcanP55066 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NcanP55066 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
NcanP55066 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NcanP55066 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.37■■□□□ 1.17
NcanP55066 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
NcanP55066 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NcanP55066 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NcanP55066 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NcanP55066 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.37■■□□□ 1.17
NcanP55066 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.36■■□□□ 1.17
NcanP55066 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NcanP55066 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.36■■□□□ 1.17
NcanP55066 Gm10033-202ENSMUST00000211874 928 ntBASIC22.36■■□□□ 1.17
NcanP55066 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NcanP55066 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NcanP55066 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.35■■□□□ 1.17
NcanP55066 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NcanP55066 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
NcanP55066 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.34■■□□□ 1.17
NcanP55066 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NcanP55066 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.34■■□□□ 1.17
NcanP55066 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.34■■□□□ 1.17
NcanP55066 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.34■■□□□ 1.17
NcanP55066 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NcanP55066 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.34■■□□□ 1.17
NcanP55066 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.34■■□□□ 1.17
NcanP55066 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NcanP55066 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NcanP55066 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms