Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.41■■□□□ 1.34
Hmgcs2P54869 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs2P54869 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs2P54869 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs2P54869 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs2P54869 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Hmgcs2P54869 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Hmgcs2P54869 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.34
Hmgcs2P54869 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Hmgcs2P54869 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.39■■□□□ 1.33
Hmgcs2P54869 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.39■■□□□ 1.33
Hmgcs2P54869 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hmgcs2P54869 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.37■■□□□ 1.33
Hmgcs2P54869 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hmgcs2P54869 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Gm8493-201ENSMUST00000196881 489 ntBASIC23.36■■□□□ 1.33
Hmgcs2P54869 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs2P54869 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs2P54869 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.35■■□□□ 1.33
Hmgcs2P54869 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs2P54869 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs2P54869 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Hmgcs2P54869 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hmgcs2P54869 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hmgcs2P54869 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hmgcs2P54869 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.33■■□□□ 1.33
Hmgcs2P54869 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hmgcs2P54869 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hmgcs2P54869 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hmgcs2P54869 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.32■■□□□ 1.32
Hmgcs2P54869 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hmgcs2P54869 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Hmgcs2P54869 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.31■■□□□ 1.32
Hmgcs2P54869 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Hmgcs2P54869 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs2P54869 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Hmgcs2P54869 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Hmgcs2P54869 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.29■■□□□ 1.32
Hmgcs2P54869 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.29■■□□□ 1.32
Hmgcs2P54869 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hmgcs2P54869 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Hmgcs2P54869 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hmgcs2P54869 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hmgcs2P54869 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hmgcs2P54869 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.28■■□□□ 1.32
Hmgcs2P54869 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Hmgcs2P54869 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
Hmgcs2P54869 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Hmgcs2P54869 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hmgcs2P54869 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Hmgcs2P54869 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hmgcs2P54869 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.27■■□□□ 1.32
Hmgcs2P54869 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hmgcs2P54869 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.27■■□□□ 1.32
Hmgcs2P54869 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hmgcs2P54869 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms