Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.14■■□□□ 1.29
Nek1P51954 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nek1P51954 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Nek1P51954 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nek1P51954 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nek1P51954 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.13■■□□□ 1.29
Nek1P51954 Gm14117-201ENSMUST00000122417 843 ntBASIC23.13■■□□□ 1.29
Nek1P51954 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nek1P51954 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nek1P51954 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nek1P51954 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.13■■□□□ 1.29
Nek1P51954 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nek1P51954 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nek1P51954 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nek1P51954 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nek1P51954 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nek1P51954 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.1■■□□□ 1.29
Nek1P51954 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Nek1P51954 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Nek1P51954 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Nek1P51954 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.09■■□□□ 1.29
Nek1P51954 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
Nek1P51954 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Nek1P51954 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.08■■□□□ 1.29
Nek1P51954 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.08■■□□□ 1.29
Nek1P51954 Gm45102-201ENSMUST00000207427 857 ntBASIC23.08■■□□□ 1.29
Nek1P51954 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Nek1P51954 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Nek1P51954 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nek1P51954 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nek1P51954 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Nek1P51954 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nek1P51954 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Nek1P51954 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Nek1P51954 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Nek1P51954 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Nek1P51954 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
Nek1P51954 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nek1P51954 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nek1P51954 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.05■■□□□ 1.28
Nek1P51954 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.05■■□□□ 1.28
Nek1P51954 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Nek1P51954 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.05■■□□□ 1.28
Nek1P51954 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.05■■□□□ 1.28
Nek1P51954 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Nek1P51954 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Nek1P51954 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Nek1P51954 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Nek1P51954 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.04■■□□□ 1.28
Nek1P51954 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nek1P51954 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nek1P51954 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nek1P51954 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.04■■□□□ 1.28
Nek1P51954 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nek1P51954 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Nek1P51954 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Nek1P51954 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nek1P51954 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Nek1P51954 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Nek1P51954 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Nek1P51954 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms