Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SftpbP50405 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SftpbP50405 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SftpbP50405 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.22■□□□□ 0.99
SftpbP50405 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SftpbP50405 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SftpbP50405 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SftpbP50405 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SftpbP50405 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SftpbP50405 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SftpbP50405 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SftpbP50405 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
SftpbP50405 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SftpbP50405 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SftpbP50405 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SftpbP50405 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SftpbP50405 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SftpbP50405 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SftpbP50405 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.2■□□□□ 0.98
SftpbP50405 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SftpbP50405 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SftpbP50405 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.19■□□□□ 0.98
SftpbP50405 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SftpbP50405 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SftpbP50405 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SftpbP50405 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.18■□□□□ 0.98
SftpbP50405 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SftpbP50405 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SftpbP50405 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SftpbP50405 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SftpbP50405 Gm10420-201ENSMUST00000121713 882 ntBASIC21.17■□□□□ 0.98
SftpbP50405 Mir6538-201ENSMUST00000183713 110 ntBASIC21.17■□□□□ 0.98
SftpbP50405 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
SftpbP50405 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpbP50405 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SftpbP50405 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpbP50405 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpbP50405 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SftpbP50405 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.16■□□□□ 0.98
SftpbP50405 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpbP50405 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.16■□□□□ 0.98
SftpbP50405 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SftpbP50405 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SftpbP50405 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SftpbP50405 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SftpbP50405 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SftpbP50405 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SftpbP50405 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SftpbP50405 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SftpbP50405 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SftpbP50405 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SftpbP50405 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SftpbP50405 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SftpbP50405 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SftpbP50405 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SftpbP50405 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SftpbP50405 Notumos-201ENSMUST00000151998 2659 ntBASIC21.13■□□□□ 0.97
SftpbP50405 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SftpbP50405 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpbP50405 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpbP50405 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpbP50405 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SftpbP50405 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SftpbP50405 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.11■□□□□ 0.97
SftpbP50405 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SftpbP50405 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SftpbP50405 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SftpbP50405 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.1■□□□□ 0.97
SftpbP50405 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SftpbP50405 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.1■□□□□ 0.97
SftpbP50405 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SftpbP50405 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SftpbP50405 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SftpbP50405 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SftpbP50405 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SftpbP50405 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SftpbP50405 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SftpbP50405 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SftpbP50405 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms