Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Nkx2-1P50220 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Gm44428-201ENSMUST00000204474 874 ntBASIC17.12■□□□□ 0.33
Nkx2-1P50220 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx2-1P50220 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-1P50220 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.12■□□□□ 0.33
Nkx2-1P50220 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx2-1P50220 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-1P50220 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.1■□□□□ 0.33
Nkx2-1P50220 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-1P50220 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-1P50220 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-1P50220 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.09■□□□□ 0.33
Nkx2-1P50220 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-1P50220 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-1P50220 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-1P50220 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-1P50220 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Nkx2-1P50220 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx2-1P50220 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Nkx2-1P50220 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.08■□□□□ 0.32
Nkx2-1P50220 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-1P50220 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Nkx2-1P50220 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-1P50220 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-1P50220 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-1P50220 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-1P50220 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-1P50220 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-1P50220 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.05■□□□□ 0.32
Nkx2-1P50220 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.05■□□□□ 0.32
Nkx2-1P50220 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx2-1P50220 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms