Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Thbs1P35441 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.22■□□□□ 0.67
Thbs1P35441 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.22■□□□□ 0.67
Thbs1P35441 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.22■□□□□ 0.67
Thbs1P35441 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thbs1P35441 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Thbs1P35441 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thbs1P35441 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thbs1P35441 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Thbs1P35441 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.21■□□□□ 0.67
Thbs1P35441 Gm43566-201ENSMUST00000196851 808 ntBASIC19.21■□□□□ 0.67
Thbs1P35441 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thbs1P35441 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thbs1P35441 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thbs1P35441 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thbs1P35441 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Thbs1P35441 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.2■□□□□ 0.66
Thbs1P35441 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.2■□□□□ 0.66
Thbs1P35441 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thbs1P35441 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.19■□□□□ 0.66
Thbs1P35441 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thbs1P35441 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Thbs1P35441 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thbs1P35441 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Thbs1P35441 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thbs1P35441 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.19■□□□□ 0.66
Thbs1P35441 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
Thbs1P35441 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Thbs1P35441 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thbs1P35441 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thbs1P35441 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thbs1P35441 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thbs1P35441 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Thbs1P35441 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Thbs1P35441 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Thbs1P35441 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Thbs1P35441 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thbs1P35441 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Thbs1P35441 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Thbs1P35441 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thbs1P35441 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thbs1P35441 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Thbs1P35441 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thbs1P35441 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Thbs1P35441 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Thbs1P35441 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Thbs1P35441 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thbs1P35441 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thbs1P35441 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Thbs1P35441 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Thbs1P35441 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
Thbs1P35441 Gm13238-201ENSMUST00000117655 780 ntBASIC19.16■□□□□ 0.66
Thbs1P35441 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.16■□□□□ 0.66
Thbs1P35441 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thbs1P35441 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Thbs1P35441 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thbs1P35441 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Thbs1P35441 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Thbs1P35441 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Thbs1P35441 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thbs1P35441 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.14■□□□□ 0.65
Thbs1P35441 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thbs1P35441 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thbs1P35441 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thbs1P35441 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thbs1P35441 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.13■□□□□ 0.65
Thbs1P35441 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thbs1P35441 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Thbs1P35441 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
Thbs1P35441 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thbs1P35441 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thbs1P35441 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms