Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a11P31650 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.65■□□□□ 0.74
Slc6a11P31650 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a11P31650 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a11P31650 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.65■□□□□ 0.74
Slc6a11P31650 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a11P31650 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a11P31650 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a11P31650 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc6a11P31650 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.64■□□□□ 0.73
Slc6a11P31650 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a11P31650 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a11P31650 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a11P31650 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a11P31650 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Slc6a11P31650 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a11P31650 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a11P31650 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a11P31650 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a11P31650 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a11P31650 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a11P31650 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a11P31650 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a11P31650 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc6a11P31650 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a11P31650 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a11P31650 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.62■□□□□ 0.73
Slc6a11P31650 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Slc6a11P31650 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc6a11P31650 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a11P31650 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a11P31650 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a11P31650 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a11P31650 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc6a11P31650 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Slc6a11P31650 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a11P31650 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a11P31650 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a11P31650 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a11P31650 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.59■□□□□ 0.73
Slc6a11P31650 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.59■□□□□ 0.73
Slc6a11P31650 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Slc6a11P31650 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a11P31650 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Slc6a11P31650 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.59■□□□□ 0.73
Slc6a11P31650 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a11P31650 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a11P31650 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a11P31650 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Slc6a11P31650 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a11P31650 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a11P31650 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a11P31650 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc6a11P31650 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.58■□□□□ 0.72
Slc6a11P31650 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.57■□□□□ 0.72
Slc6a11P31650 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a11P31650 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a11P31650 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc6a11P31650 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a11P31650 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a11P31650 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.56■□□□□ 0.72
Slc6a11P31650 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a11P31650 Gm9959-201ENSMUST00000068277 390 ntBASIC19.56■□□□□ 0.72
Slc6a11P31650 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Slc6a11P31650 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc6a11P31650 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a11P31650 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc6a11P31650 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a11P31650 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.55■□□□□ 0.72
Slc6a11P31650 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a11P31650 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a11P31650 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a11P31650 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a11P31650 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a11P31650 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a11P31650 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a11P31650 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a11P31650 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms